Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846564.1_cds_XP_016509715.1_22622
CDS Infomation

[gene=LOC107827149] [db_xref=GeneID:107827149] [protein=elongator complex protein 3-like isoform X2] [frame=2] [exception=annotated by transcript or proteomic data] [protein_id=XP_016509715.1] [location=complement(join(18792..19103,19745..19849,19935..20154,20340..20506,20838..21012,21772..21944,22023..22092,22329..>22571))] [gbkey=CDS]
Sequence

ATCGCTGCTTTGCCTGACTCCGAACGTGAATCACTGCTTCCCAAACTCCGAGCCAAGCCC
GTTCGTACAGCGTCGGGCATAGCAGTGGTTGCTGTAATGTCCAAGCCTCATCGCTGTCCT
CATATAGCTACCACTGGAAACATTTGTGTTTATTGCCCTGGTGGACCCGATTCTGATTTT
GAGTACAGTACACAGTCATACACTGGATATGAGCCTACTAGTATGCGAGCTATTCGAGCT
AGATACAACCCTTATGTACAAGCTCGAAGCCGGATTGATCAACTTAAGAGATTGGGTCAC
AGTGTTGACAAGGTTGAATTCATCTTGATGGGAGGTACATTCATGTCGTTGCCAGCAGAA
TACCGTGACTACTTCATACGGAATCTTCATGATGCTTTATCTGGACATACTTCTGCCAAT
GTTGAAGAGGCTGTTGCTTACTCCGAACATGGGGCTACAAAGTGCATTGGGATGACAATT
GAAACGAGGCCAGACTACTGCCTTGGACCTCATCTGAGGCAGATGCTTTCTTATGGTTGT
ACTCGGCTAGAAATTGGAGTCCAGAGCACATACGAGGATGTTGCTCGTGATACAAATAGA
GGCCACACTGTAGCAGCTGTGGCTGATTGCTTTTGTTTGGCAAAGGATGCTGGCTTCAAG
GTCGTTGCTCATATGATGCCTGACCTTCCAAATGTTGGTGTTGAGAGAGATATGGAGAGT
TTTAAGGAATTCTTTGAAAGTCCTTCATTTAGGGCAGATGGACTTAAAATTTATCCGACC
CTTGTTATTCGTGGCACGGGACTTTATGAACTGTGGAAAACTGGAAGGTATCGGAATTAT
CCGCCAGAGCAGCTTGTAGACATTGTAGCAAGGATTCTTTCGCTGGTGCCACCTTGGACA
CGTGTTTACAGGGTTCAACGTGATATCCCTATGCCTCTAGTGACATCAGGAGTTGAGAAA
GGGAATCTCCGAGAACTGGCTTTAGCTCGAATGGATGATCTTGGCTTGAAATGCCGAGAT
GTCCGAACACGTGAAGCTGGGATCCAGGACATCCACCACAAGATAAAGCCTGAAGAAGTT
GAGCTTGTTCGCCGTGATTATACAGCAAATGACGGATGGGAAACTTTCCTTTCATACGAA
GATACACGCCAGGATATTCTTGTTGGATTGCTACGACTGCGGAAGTGTGGACGGAATGTA
ACTTGCCCAGAACTCATTGGGAGGTGTTCTATTGTTCGTGAGCTTCATGTGTATGGGACA
GCAGTTCCTGTCCATGGTCGAGACACAGATAAGCTGCAGCACCAGGGTTATGGTACTCTG
CTGATGGAGGAGGGGGAGAGAATTGCTCTAAGGGAGCATAGGTCGACCAAACTGGCAGTT
ATCTCAGGTGTAGGAACCCGGCATTACTATAGAAAGCTAGGCTATGAGCTTGAAGGTCCG
TACATGGTAAAAAACCTCGTGTAG

Peptide Sequence

PEP ID

XP_016509715.1
PEP Infomation

PREDICTED: elongator complex protein 3-like isoform X2 [Nicotiana tabacum]
Sequence

MAAAAAVADTRKLPRPGRGGVVSLGLTEEEARVRAITEIVNNMVELSRKGKDVDLNALKS
AACRKYGLSRAPKLVEMIAALPDSERESLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
KVEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETR
PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
HMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE
QLVDIVARILSLVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRT
REAGIQDIHHKIKPEEVELVRRDYTANDGWETFLSYEDTRQDILVGLLRLRKCGRNVTCP
ELIGRCSIVRELHVYGTAVPVHGRDTDKLQHQGYGTLLMEEGERIALREHRSTKLAVISG
VGTRHYYRKLGYELEGPYMVKNLV

Transcript Sequence

Gene sequence data has not been registered.